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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944483.1_cds_XP_016487279.1_78030
CDS Infomation

[gene=LOC107807428] [db_xref=GeneID:107807428] [protein=exopolygalacturonase-like] [protein_id=XP_016487279.1] [location=join(7841..8029,8891..9205,10175..10464,10606..10822,10915..11148)] [gbkey=CDS]
Sequence

ATGGCGATGACTACGATTGGTTTAGTCCTCATTCTTGTGTTGTATTCAGCTTTGGTTATT
ACGTGCAATGCAGCTGTAGTTGGTGGCCTTCTTCCTCAACCTGCAGGTGGCAATAATATT
GCTGATCAAACCATTTTTAACGTCTTGAATTTTGGTGCCAAACCTAACTCAGAACTCATA
AGCACACAGGCATTTATGAGGGCATGGCGAGCAGCATGTGATTTCAATGGGAGAGCAAGA
CTTTTTGTCCCACCTGGAGTATATAATCTAGCAGAGACCATATTTTCAGGACCATGCAAA
GGAACACATCCTATAATTGTTCAAATTGCAGGAACCTTAAAAGCTGTGGCTGATGTTTCT
GAATATTCAAATTTTGCTTGGATCTCTTTTGATTCAATTAATGGCATTATCATTACTGGT
GGAGGCACTTTAGATGCTCAAGGCCAAGCTCTTTGGCAATTTAATGACTGTAAAAGCAAT
TCTAATTGTGTTCACCTCCCTGCTACATTATTTTTCAATGGTGTAGAGAACGGAAAAGTG
ATGAGGCTGAATTTGATAAATAGCATGGGATTTCATATACATATTACTAATAGCTATTTA
GTAAGGTTTCATGCCCTTACCATTGATGCTCCAGAAAACAGCCCAAATACTGATGGCATA
CACATAAGCAAATCTAACACTATAAAACTCTCCAGAAGTGTAATTAGAACAGGGGATGAT
TGTGTCTCATTTGGACAAGGAGCAACTAATGTGACCGTTAACAAAGTCACCTGTGGCCCT
GGCCATGGCATTAGTATAGGTAGTATTGGTAAGTTGTCTGGCGAACTGGAAATTAGAGGA
CTCATCGTGAAGAATTGCACGTTGAGGGGCACAACAAATGGTATCAGAATTAAAACTTTT
GCAGGGGCAAATCCTAACAGAGCAATAGGGATGATGTTCAGCGATATTGTCATGGAAAAC
GTTAAAAATCCAATCATCATTGATCAGAGTTATGGTGACAAATCCACCGAGCCATCACAA
GTAAGAATAAGTGATGTAATTTACCAGAATATAAGGGGAACAACAATAAGTGAAGTAGCA
GTGCAACTGATGTGCAGTGCACGACTCCCTTGCCTAAATGTTCGACTTACCAACATAAAT
TTGAAGCATATAGCAAATACGCCAATTACTTCGCAATGCCAAAATGCAAATGTTGGCTAT
ACTGGCATCCAATTCCCACCTCCTTGCCACGCACTCTCTTCATAG

Peptide Sequence

PEP ID

XP_016487279.1
PEP Infomation

PREDICTED: exopolygalacturonase-like [Nicotiana tabacum]
Sequence

MAMTTIGLVLILVLYSALVITCNAAVVGGLLPQPAGGNNIADQTIFNVLNFGAKPNSELI
STQAFMRAWRAACDFNGRARLFVPPGVYNLAETIFSGPCKGTHPIIVQIAGTLKAVADVS
EYSNFAWISFDSINGIIITGGGTLDAQGQALWQFNDCKSNSNCVHLPATLFFNGVENGKV
MRLNLINSMGFHIHITNSYLVRFHALTIDAPENSPNTDGIHISKSNTIKLSRSVIRTGDD
CVSFGQGATNVTVNKVTCGPGHGISIGSIGKLSGELEIRGLIVKNCTLRGTTNGIRIKTF
AGANPNRAIGMMFSDIVMENVKNPIIIDQSYGDKSTEPSQVRISDVIYQNIRGTTISEVA
VQLMCSARLPCLNVRLTNINLKHIANTPITSQCQNANVGYTGIQFPPPCHALSS

Transcript Sequence

Gene sequence data has not been registered.